Showing results 49 to 60 of 92 total
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Journal articles
Didier Law-Hine, Mehdi Zeghal, Stéphane Bressanelli, Doru Constantin, Guillaume Tresset. Identification of a major intermediate along the self-assembly pathway of an icosahedral viral capsid by using an analytical model of a spherical patch.. Soft Matter, 2016, 12 (32), pp.6728-36. ⟨hal-01356007⟩
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Marta De Frutos, Amélie Leforestier, Jéril Degrouard, Nebraska Zambrano, Frank Wien, et al.. Can Changes in Temperature or Ionic Conditions Modify the DNA Organization in the Full Bacteriophage Capsid?. Journal of Physical Chemistry B, 2016, ⟨10.1021/acs.jpcb.6b01783⟩. ⟨hal-01340679⟩
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Baeckkyoung Sung, Amélie Leforestier, Françoise Livolant. Coexistence of coil and globule domains within a single confined DNA chain. Nucleic Acids Research, 2016, 44 (3), pp.1421-1427. ⟨10.1093/nar/gkv1494⟩. ⟨hal-04882446⟩
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Journal articles
Didier Law-Hine, Anil K Sahoo, Virginie Bailleux, Mehdi Zeghal, Sylvain Prevost, et al.. Reconstruction of the Disassembly Pathway of an Icosahedral Viral Capsid and Shape Determination of Two Successive Intermediates.. Journal of Physical Chemistry Letters, 2015, 6 (17), pp.3471-6. ⟨10.1021/acs.jpclett.5b01478⟩. ⟨hal-01446050⟩
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Journal articles
Ciprian Iliescu, Guolin Xu, Wen Hao Tong, Fang Yu, Cătălin Mihai Bălan, et al.. Cell patterning using a dielectrophoretic–hydrodynamic trap. Microfluidics and Nanofluidics, 2015, 19 (2), pp.363-373. ⟨10.1007/s10404-015-1568-2⟩. ⟨hal-04882654⟩
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François Muller, Thibault Dégousée, Jéril Degrouard, Annie Brûlet, Anniina Salonen. Probing structure in submicronic aqueous assemblies of emulsified microemulsions and charged spherical colloids using SANS and cryo-TEM. Journal of Colloid and Interface Science, 2015, 446, pp.114-121. ⟨10.1016/j.jcis.2015.01.007⟩. ⟨hal-04882612⟩
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Ciprian Iliescu, Guillaume Tresset. Microfluidics-Driven Strategy for Size-Controlled DNA Compaction by Slow Diffusion through Water Stream. Chemistry of Materials, 2015, 27 (24), pp.8193-8197. ⟨10.1021/acs.chemmater.5b04129⟩. ⟨hal-04882672⟩
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Journal articles
Benoit Maury, Cristine Gonçalves, Guillaume Tresset, Mehdi Zeghal, Hervé Cheradame, et al.. Influence of pDNA availability on transfection efficiency of polyplexes in non-proliferative cells.. Biomaterials, 2014, 35 (22), pp.5977-5985. ⟨10.1016/j.biomaterials.2014.04.007⟩. ⟨hal-01179393⟩
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Journal articles
Ciprian Iliescu, Cətəlin Mərculescu, Shrinivas Venkataraman, Baptiste Languille, Hanry Yu, et al.. On-chip controlled surfactant-DNA coil-globule transition by rapid solvent exchange using hydrodynamic flow focusing. Langmuir, 2014, 30 (44), pp.13125-13136. ⟨10.1021/la5035382⟩. ⟨hal-04882767⟩
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Guillaume Tresset, Mouna Tatou, Clémence Le Cœur, Mehdi Zeghal, Virginie Bailleux, et al.. Weighing polyelectrolytes packaged in viruslike particles. Physical Review Letters, 2014, 113 (12), ⟨10.1103/PhysRevLett.113.128305⟩. ⟨hal-04882750⟩
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M. de Frutos, A. Leforestier, F. Livolant. Relationship between the genome packing in the bacteriophage capsid and the kinetics of DNA ejection. Biophysical Reviews and Letters, 2014, 9 (1), pp.81-104. ⟨10.1142/S1793048013500069⟩. ⟨hal-04882810⟩
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Journal articles
Guillaume Tresset, Clémence Le Coeur, Jean-François Bryche, Mouna Tatou, Mehdi Zeghal, et al.. Norovirus Capsid Proteins Self-Assemble through Biphasic Kinetics via Long-Lived Stave-like Intermediates. Journal of the American Chemical Society, 2013, 135 (41), pp.15378-15381. ⟨10.1021/ja403550f⟩. ⟨hal-00880969⟩
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Tresset, G 2024 Glass-like relaxation dynamics during the disorder-order transition of viral nucleocapsids.
Tresset, G 2023 Antivirals alter the kinetic assembly pathway and elastic properties of Hepatitis B virus capsids.
Chang, L-H, Ghosh, S, Papale, A, Luppino, J M, Miranda, M, Piras, V, Degrouard, J, Edouard, J, Poncelet, M, Lecouvreur, N, Bloyer, S, Leforestier, A, Joyce, E F, Holcman, D, and Noordermeer, D 2023 Multi-feature clustering of CTCF binding creates robustness for loop extrusion blocking and Topologically Associating Domain boundaries. Nature Communications, 14(1): 5615. DOI: https://doi.org/10.1038/s41467-023-41265-y
Jeon, W, Choi, C, Cheon, J, Lee, J, Lansac, Y, and Jang, Y H 2023 Narrow–Wide Copolymers Designed for Red-Selective Absorption by Time-Dependent Density Functional Theory Calculations. The Journal of Physical Chemistry C, 127(31): 15290–15299. DOI: https://doi.org/10.1021/acs.jpcc.3c01587
Kra, K, Li, S, Gargowitsch, L, Degrouard, J, Pérez, J, Zandi, R, Bressanelli, S, and Tresset, G 2023 Energetics and Kinetic Assembly Pathways of Hepatitis B Virus Capsids in the Presence of Antivirals. ACS Nano, 17(13): 12723–12733. DOI: https://doi.org/10.1021/acsnano.3c03595
Chaupard, M, Degrouard, J, Li, X, Stéphan, O, Kociak, M, Gref, R, and de Frutos, M 2023 Nanoscale Multimodal Analysis of Sensitive Nanomaterials by Monochromated STEM-EELS in Low-Dose and Cryogenic Conditions. ACS Nano, 17(4): 3452–3464. DOI: https://doi.org/10.1021/acsnano.2c09571
Leforestier, A 2023 Order and disorder in DNA toroids.
Tresset, G 2023 Viruses as bioinspired nanocapsules.
Leforestier, A 2023 Morphogenèse des tores d’ADN condensé : vers la microscopie électronique en phase liquide.
Gaichies, T 2023 Entraînement d’air par un jet incliné.
Leforestier, A 2023 Optimization of cryo-tomography of vitreous sections for tissue and cell imaging.
Leforestier, A 2023 Cryo-electron tomography reveals chromatin landscape at the nanometer scale in situ.
Leforestier, A 2023 Role of surfactants in electron cryo-microscopy thin film preparation.
Michon, B, López-Sánchez, U, Degrouard, J, Nury, H, Leforestier, A, Rio, E, Salonen, A, and Zoonens, M 2023 Role of surfactants in electron cryo-microscopy film preparation. Biophysical Journal, 122(10): 1846–1857. DOI: https://doi.org/10.1016/j.bpj.2023.04.016
Leforestier, A 2023 Electrostatic zipper tunes the DNA double helix conformation and the toroid morphology.
Leforestier, A 2023 Electrostatic zipper in toroidal DNA condensates.
Leforestier, A 2023 Cryo-electron tomography reveals chromatin landscape at the nanometer scale in situ.
Chhetri, K B, Jang, Y H, Lansac, Y, and Maiti, P K 2023 DNA groove preference shift upon phosphorylation of a protamine-like cationic peptide. Physical Chemistry Chemical Physics, 25(45): 31335–31345. DOI: https://doi.org/10.1039/D3CP03803C
Tresset, G 2023 Energetics and kinetic assembly pathways of Hepatitis B virus in the presence of antivirals.
Delecourt, G, Plet, L, Guen, Y L, Tezgel, O, Tresset, G, Midoux, P, Montier, T, Bennevault, V, and Guégan, P 2022 Synthesis of Double Hydrophilic Block Copolymers Poly(2‐isopropyl‐2‐oxazoline‐ b ‐ethylenimine) and their DNA Transfection Efficiency. Macromolecular Bioscience, 2200296. DOI: https://doi.org/10.1002/mabi.202200296
Leforestier, A 2022 Optimisation de la cryo-microscopie de sections vitreuses pour l’imagerie cellulaire.
Leforestier, A 2022 Morphogénèse et ultrastructure des tores d’ADN condensé.
Leforestier, A 2022 La cryo-microscopie électronique pour l’imagerie en physique des matériaux hydratés.
Leforestier, A 2022 Cryo-electron tomography reveals chromatin landscape at the nanometer scale in situ.
Usma, C L, Mariot, S, Goldmann, C, Roché, M, Salonen, A, and Tresset, G 2022 Fluorescent Marangoni Flows under Quasi-Steady Conditions. Langmuir, 38(30): 9129–9135. DOI: https://doi.org/10.1021/acs.langmuir.2c00619
Choi, C, de Izarra, A, Han, I, Jeon, W, Lansac, Y, and Jang, Y H 2022 Hard-Cation-Soft-Anion Ionic Liquids for PEDOT:PSS Treatment. The Journal of Physical Chemistry B, 126(7): 1615–1624. DOI: https://doi.org/10.1021/acs.jpcb.1c09001
Chhetri, K B, Jang, Y H, Lansac, Y, and Maiti, P K 2022 Effect of phosphorylation of protamine-like cationic peptide on the binding affinity to DNA. Biophysical Journal, 121(24): 4830–4839. DOI: https://doi.org/10.1016/j.bpj.2022.09.025
Harastani, M, Eltsov, M, Leforestier, A, and Jonic, S 2022 TomoFlow: Analysis of Continuous Conformational Variability of Macromolecules in Cryogenic Subtomograms based on 3D Dense Optical Flow. Journal of Molecular Biology, 434(2): 167381. DOI: https://doi.org/10.1016/j.jmb.2021.167381
Leforestier, A 2022 Order and disporder in DNA toroids.
Kra, K 2022 Self-assembly kinetic pathways of hepatitis B virus capsids in the presence or not of antivirals.
Ruszkowski, M, Strugala, A, Indyka, P, Tresset, G, Figlerowicz, M, and Urbanowicz, A 2022 Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure. Nanoscale, 14(8): 3224–3233. DOI: https://doi.org/10.1039/D1NR05650F
Miguet, J, Pasquet, M, Rouyer, F, Fang, Y, and Rio, E 2021 Marginal regeneration-induced drainage of surface bubbles. Physical Review Fluids, 6(10): L101601. DOI: https://doi.org/10.1103/PhysRevFluids.6.L101601
Leforestier, A 2021 Ordre et désordre dans les tores d’ADN analysés par cryo tomographie électronique.
Leforestier, A 2021 Curved DNA hexagonal arrays in vitro & in vivo.
Delville, Pierre Henri 2021 Nage bactérienne et émergence de mouvements collectifs (TH). Orsay, France: Université Paris-Saclay.
Mukherjee, A, de Izarra, A, Degrouard, J, Olive, E, Maiti, P K, Jang, Y H, and Lansac, Y 2021 Protamine-Controlled Reversible DNA Packaging: A Molecular Glue. ACS Nano, 15(8): 13094–13104. DOI: https://doi.org/10.1021/acsnano.1c02337
Harastani, M, Eltsov, M, Leforestier, A, and Jonic, S 2021 HEMNMA-3D: Cryo Electron Tomography Method Based on Normal Mode Analysis to Study Continuous Conformational Variability of Macromolecular Complexes. Frontiers in Molecular Biosciences, 8: 663121. DOI: https://doi.org/10.3389/fmolb.2021.663121
Barberi, L, Livolant, F, Leforestier, A, and Lenz, M 2021 Local structure of DNA toroids reveals curvature-dependent intermolecular forces. Nucleic Acids Research, 49(7): 3709–3718. DOI: https://doi.org/10.1093/nar/gkab197
Mukherjee, A, Saurabh, S, Olive, E, Jang, Y H, and Lansac, Y 2021 Protamine Binding Site on DNA: Molecular Dynamics Simulations and Free Energy Calculations with Full Atomistic Details. The Journal of Physical Chemistry B, 125(12): 3032–3044. DOI: https://doi.org/10.1021/acs.jpcb.0c09166
de Izarra, A, Choi, C, Jang, Y H, and Lansac, Y 2021 Ionic Liquid for PEDOT:PSS Treatment. Ion Binding Free Energy in Water Revealing the Importance of Anion Hydrophobicity. The Journal of Physical Chemistry B, 125(7): 1916–1923. DOI: https://doi.org/10.1021/acs.jpcb.0c10068
Marichal, L, Gargowitsch, L, Rubim, R L, Sizun, C, Kra, K, Bressanelli, S, Dong, Y, Panahandeh, S, Zandi, R, and Tresset, G 2021 Relationships between RNA topology and nucleocapsid structure in a model icosahedral virus. Biophysical Journal, 120(18): 3925–3936. DOI: https://doi.org/10.1016/j.bpj.2021.08.021
Leforestier, A 2021 HEMNMA-3D: a new method for continuous conformational variability analysis of macromolecules. Application to cryo electron tomography of nucleosomes in situ.
Leforestier, A 2020 Exploring nucleosome conforation and local order in vitro & in situ.
Chevreuil, M, Lecoq, L, Wang, S, Gargowitsch, L, Nhiri, N, Jacquet, E, Zinn, T, Fieulaine, S, Bressanelli, S, and Tresset, G 2020 Nonsymmetrical Dynamics of the HBV Capsid Assembly and Disassembly Evidenced by Their Transient Species. The Journal of Physical Chemistry B, 124(45): 9987–9995. DOI: https://doi.org/10.1021/acs.jpcb.0c05024
Sanchez-Guzman, D, Giraudon--Colas, G, Marichal, L, Boulard, Y, Wien, F, Degrouard, J, Baeza-Squiban, A, Pin, S, Renault, J P, and Devineau, S 2020 In Situ Analysis of Weakly Bound Proteins Reveals Molecular Basis of Soft Corona Formation. ACS Nano, 14(7): 9073–9088. DOI: https://doi.org/10.1021/acsnano.0c04165
Marichal, L, Degrouard, J, Gatin, A, Raffray, N, Aude, J-C, Boulard, Y, Combet, S, Cousin, F, Hourdez, S, Mary, J, Renault, J-P, and Pin, S 2020 From Protein Corona to Colloidal Self-Assembly: The Importance of Protein Size in Protein–Nanoparticle Interactions. Langmuir, 36(28): 8218–8230. DOI: https://doi.org/10.1021/acs.langmuir.0c01334
Panahandeh, S, Li, S, Marichal, L, Leite Rubim, R, Tresset, G, and Zandi, R 2020 How a Virus Circumvents Energy Barriers to Form Symmetric Shells. ACS Nano, 14(3): 3170–3180. DOI: https://doi.org/10.1021/acsnano.9b08354
Chevreuil, M 2020 Phénomènes dynamiques d’auto-assemblage et désassemblage dans des virus icosaédriques (TH). Orsay, France: Université Paris-Saclay.
Du, H, de Oliveira, F A, Albuquerque, L J C, Tresset, G, Pavlova, E, Huin, C, Guégan, P, and Giacomelli, F C 2020 Polyglycidol-Stabilized Nanoparticles as a Promising Alternative to Nanoparticle PEGylation: Polymer Synthesis and Protein Fouling Considerations. Langmuir, 36(5): 1266–1278. DOI: https://doi.org/10.1021/acs.langmuir.9b03687
Ni, M, Tresset, G, Iliescu, C, and Hauser, C A E 2020 Ultrashort Peptide Theranostic Nanoparticles by Microfluidic-Assisted Rapid Solvent Exchange. IEEE Transactions on NanoBioscience, 19(4): 627–632. DOI: https://doi.org/10.1109/TNB.2020.3007103